Screenshots

Description

Ligand Viewer is a 2D visualiser that allows you to EFFICIENTLY, QUICKLY and EASILY analyse the interactions and placement of docked molecules within a protein.

Use and view a large variety of details such as all close side chains, all close hydrogen bonds, a customisable xyz plane, and side chain highlighting to make it easy to visualise how each molecule is docked inside the protein.

+ Use the popular 3D molecular file formats sdf, sd, and pdb: *Use sdf or sd files (MDL MOL format) for the ligand and pdb for the protein*
To convert between molecular file formats we recommend to use the free open source software openbabel available at http://openbabel.org/wiki/Category:Installation
The app only allows sd and sdf formats as in these formats you can store molecular properties for the ligand which can be displayed within the app.

+ For each molecule, you can also view its properties that are listed in the sd/sdf file and compare them very easily with other molecules!

What’s New

Version 1.4

The details window has been transformed into a user-friendly table!
- View all details for each molecule at a single glance
- Move columns around so you can focus on comparing the values you're interested in
- Click on a column title to sort the table for that column
- Click on a row to view that molecule

-=Previous recent updates=-
Functionality (from v1.3.7)
- You can now pan the screen to zoom in and out
- Left and right arrow keys will switch between molecules
UI Improvements (from v1.3.7)
- Made buttons more obvious
Bug fixes (from v1.3.5)
- Fixed a variety of issues concerning negative values in the protein file amongst other coordinate issues

Ratings and Reviews

5.0 out of 5
1 Rating

1 Rating

Information

Seller
Joel Treutlein
Size
3.7 MB
Category
Education
Compatibility

macOS 10.13 or later, 64-bit processor

Languages

English

Age Rating
4+
Copyright
Price
$9.99

Supports

  • Family Sharing

    Up to six family members will be able to use this app with Family Sharing enabled.

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