ImmGen 12+

Christophe Benoist

Designed for iPad

    • Free

Screenshots

Description

Explore gene expression levels in different mouse and human immune system cells. Start by entering a gene name (or alias) in the search bar to see a list of hits you can swipe through.

Searching will display a "heatmap barcode" that shows how hot or cold expression of that gene is across different immune system cell lineages (B cells, T cells, Myeloid cells, etc). Toggle between 3 different datasets: mouse RNA-seq, mouse microarray, and human RNA-seq.

Press down on a cell lineage icon to see the same expression data visualized as a bar chart. Use the settings menu in the top right to toggle between a log and linear axis. In the microarray data, low expression values are partially occluded.

Back on the main "heatmap barcode" screen, if you instead press the "Show related genes" button, you'll see a "gene constellation" view. This shows its most correlated genes within certain population groups. By default, correlation is shown with respect to key populations — these are key populations across the entire immune system.

Please reach out to immgen@gmail.com for feedback or feature requests!

The data are generated by the Immunological Genome Project, an international consortium supported by the National Institutes of Health (NIAID).

What’s New

Version 3.2.0

- New human RNA-seq data
- Various small improvements

App Privacy

The developer, Christophe Benoist, indicated that the app’s privacy practices may include handling of data as described below. For more information, see the developer’s privacy policy.

Data Not Collected

The developer does not collect any data from this app.

Privacy practices may vary based on, for example, the features you use or your age. Learn More

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